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Clark Lab

MIND Informatics develops and applies integrative computational methods in biomedical and brain research, working with leading clinicians and researchers to understand and cure neurological disorders.

 

Tim Clark's research program focuses on multi-modal semantic integration of biomedical web communities, scientific discourse and experimental results.  He is the Director or the Center for Interdisciplinary Informatics, and Principal Investigator of the Semantic Web Applications in Neuromedicine (SWAN) (http://swan.mindinformatics.org) and Science Collaboration Framework (www.sciencecollaboration.org) projects.

Tim's informatics group built the reusable software platform for Stembook (www.stembook.org), an online review of stem cell biology published by the Harvard Stem Cell Institute, and created the Parkinson's Disease (PD) Online Research website (http://pdonlineresearch.org) in collaboration with the Michael J. Fox Foundation for Parkinson's Research.

researcher

Principal Investigator

Timothy W. Clark, MSc

  • Instructor in Neurology,
    Harvard Medical School
  • Director, Center for Interdisciplinary Informatics,
    MassGeneral Institute for Neurodegenerative Disease

 

 

 

Research Scientists

  • Sudeshna Das,
    Senior Program Manager  
  • Paolo Ciccarese,
    Biomedical Informatics Research & Development  
  • Marco Ocana,
    Software Developer  
  • Stephane Corlosquet,
    Bioinformatics Engineername - Post Doc Fellow

 

 

  1. Das S, Rogan M, Kawadler H, Corlosquet S, Brin S and Clark T. PD Online: a case study in scientific collaboration on the Web. Workshop on the Future of the Web for Collaborative Science, 19th International World Wide Web Conference, Raleigh, North Carolina USA - April 26-30, 2010 (accepted)
  2. Das S, Girard L, Green T, Weitzmann L, Lewis-Bowen A, and Clark T. Building Biomedical Web Communities Using a Semantically-Aware Content Management System. Briefings in Bioinformatics. 2009 Mar;10(2):129-38. Epub 2008 Dec 6. PMID: 19060302
  3. Das S, Goetz M, Girard L, Clark T. Scientific Publications on Web 3.0. 13th International Conference on Electronic Publishing (ELPUB 2009), 10-12 June 2009, Milan, Italy.
  4. Corlosquet S, Delbru R , Clark T, Polleres A, and Decker S. Produce and Consume Linked Data with Drupal. 8th International Semantic Web Conference (ISWC 2009); October 25-29, 2009, Washington DC.
  5. Passant A, Ciccarese P, Breslin J, Clark T. SWAN/SIOC: Aligning Scientific Discourse Representation and Social Semantics. Workshop on Semantic Web Applications in Scientific Discourse, 8th International Conference on Semantic Web (ISWC 2009), Oct 25-29 2009, Washington DC.

NCBI PubMed Publications